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CCT motif family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828903, updated on 18-Sep-2024

Summary

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Official Full Name
CCT motif family protein
Primary source
TAIR:AT4G27900
Locus tag
AT4G27900
See related
Araport:AT4G27900
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T13J8.10; T13J8_10
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (13890472..13893073)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Ala Neighboring gene HSP20-like chaperones superfamily protein Neighboring gene SET domain protein 16 Neighboring gene PYR1-like 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_118928.4
NM_179130.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in regulation of flower development IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
CCT motif family protein
NP_194519.1
  • CCT motif family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G53420.1); Has 1589 Blast hits to 1589 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1545; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
NP_849461.1
  • CCT motif family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G53420.1); Has 1589 Blast hits to 1589 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1545; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13890472..13893073
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_179130.3 → NP_849461.1  CCT motif family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849461.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UZH8, Q8L9Z3, Q9SUE8
    Conserved Domains (1) summary
    pfam06203
    Location:214 → 257
    CCT; CCT motif

  2. NM_118928.4 → NP_194519.1  CCT motif family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194519.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UZH8, Q8L9Z3, Q9SUE8
    Conserved Domains (1) summary
    pfam06203
    Location:214 → 257
    CCT; CCT motif
Nucleotide Protein
Heading Accession and Version

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