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MTM1 manganese tracking factor for mitochondrial SOD2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828907, updated on 18-Sep-2024

Summary

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Official Symbol
MTM1
Official Full Name
manganese tracking factor for mitochondrial SOD2
Primary source
TAIR:AT4G27940
Locus tag
AT4G27940
See related
Araport:AT4G27940
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS MANGANESE TRACKING FACTOR FOR MITOCHONDRIAL SOD2; ATMTM1; manganese tracking factor for mitochondrial SOD2; T13J8.50; T13J8_50
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Genomic context

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See MTM1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Sequence:
Chromosome: 4; NC_003075.7 (13904265..13907405)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene SET domain protein 16 Neighboring gene PYR1-like 10 Neighboring gene ncRNA Neighboring gene cytokinin response factor 4 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Significance of AtMTM1 and AtMTM2 for Mitochondrial MnSOD Activation in Arabidopsis. Hu SH, et al. Front Plant Sci, 2021. PMID 34434202, Free PMC Article
  2. Subcellular localizations of Arabidopsis myotubularins MTM1 and MTM2 suggest possible functions in vesicular trafficking between ER and cis-Golgi. Nagpal A, et al. J Plant Physiol, 2016 Aug 1. PMID 27340857
  3. AtMTM1, a novel mitochondrial protein, may be involved in activation of the manganese-containing superoxide dismutase in Arabidopsis. Su Z, et al. Planta, 2007 Sep. PMID 17522887
  4. Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Tamura K, et al. Plant Cell, 2010 Dec. PMID 21189294, Free PMC Article
  5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Arabidopsis myotubularins play a role in the vesicular trafficking between endoplasmic reticulum exit sites and cis-Golgi elements.
    Title: Subcellular localizations of Arabidopsis myotubularins MTM1 and MTM2 suggest possible functions in vesicular trafficking between ER and cis-Golgi.
  2. MTM1(At4g27940)encodes a mitochondrial protein that may be playing an important role in activation of MnSOD1 [MTM1]
    Title: AtMTM1, a novel mitochondrial protein, may be involved in activation of the manganese-containing superoxide dismutase in Arabidopsis.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_118932.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables metallochaperone activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables superoxide dismutase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in response to paraquat IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in stress response to metal ion IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
manganese tracking factor for mitochondrial SOD2
NP_567790.1
  • manganese tracking factor for mitochondrial SOD2 (MTM1); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT2G46320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13904265..13907405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118932.5 → NP_567790.1  manganese tracking factor for mitochondrial SOD2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567790.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q944H5, Q9SUE4
    UniProtKB/TrEMBL
    A0A178V3U9, A0A5S9XWI2
    Conserved Domains (1) summary
    pfam00153
    Location:320 → 410
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q944H5.1

Gene LinkOut

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