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ABCB24 ABC transporter of the mitochondrion 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828980, updated on 18-Sep-2024

Summary

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Official Symbol
ABCB24
Official Full Name
ABC transporter of the mitochondrion 2
Primary source
TAIR:AT4G28620
Locus tag
AT4G28620
See related
Araport:AT4G28620
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ABC transporter of the mitochondrion 2; ARABIDOPSIS THALIANA ABC TRANSPORTER OF THE MITOCHONDRION 2; ATATM2; ATM2; ATP-binding cassette B24; HALF-MOLECULE ABC TRANSPORTER ATM2; T5F17.70; T5F17_70
Summary
Half-molecule ABC transporter ATM2. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth.
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Genomic context

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See ABCB24 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (14135526..14137953, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene polyadenylate-binding protein 2-binding protein Neighboring gene no pollen germination related 2 Neighboring gene phosphate starvation response 1 Neighboring gene ABC transporter of the mitochondrion 1 Neighboring gene indole-3-acetic acid inducible 11 Neighboring gene Leucine-rich repeat transmembrane protein kinase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. AtATM3 is involved in heavy metal resistance in Arabidopsis. Kim DY, et al. Plant Physiol, 2006 Mar. PMID 16461380, Free PMC Article
  2. Functional characterization of AtATM1, AtATM2, and AtATM3, a subfamily of Arabidopsis half-molecule ATP-binding cassette transporters implicated in iron homeostasis. Chen S, et al. J Biol Chem, 2007 Jul 20. PMID 17517886
  3. The Arabidopsis thaliana ABC protein superfamily, a complete inventory. Sánchez-Fernández R, et al. J Biol Chem, 2001 Aug 10. PMID 11346655
  4. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
  5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_119004.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables ATPase-coupled transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in response to cadmium ion NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion HDA PubMed 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ABC transporter of the mitochondrion 2
NP_194591.1
  • ABC transporter of the mitochondrion 2 (ATM2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter of the mitochondrion 1 (TAIR:AT4G28630.1); Has 420559 Blast hits to 378258 proteins in 4123 species: Archae - 7053; Bacteria - 326651; Metazoa - 9746; Fungi - 7500; Plants - 5558; Viruses - 17; Other Eukaryotes - 64034 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    14135526..14137953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119004.1 → NP_194591.1  ABC transporter of the mitochondrion 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194591.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M0G9
    UniProtKB/TrEMBL
    A0A654FTR9
    Conserved Domains (1) summary
    COG5265
    Location:175 → 673
    ATM1; ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M0G9.1

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