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AMT1;4 ammonium transporter 1;4 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828988, updated on 18-Sep-2024

Summary

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Official Symbol
AMT1;4
Official Full Name
ammonium transporter 1;4
Primary source
TAIR:AT4G28700
Locus tag
AT4G28700
See related
Araport:AT4G28700
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ammonium transporter 1;4; F16A16.190; F16A16_190
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Genomic context

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See AMT1;4 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (14161594..14163342)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene L-tyrosine decarboxylase Neighboring gene uncharacterized protein Neighboring gene RmlC-like cupins superfamily protein Neighboring gene pfkB-like carbohydrate kinase family protein Neighboring gene Myosin family protein with Dil domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. AtAMT1;4, a pollen-specific high-affinity ammonium transporter of the plasma membrane in Arabidopsis. Yuan L, et al. Plant Cell Physiol, 2009 Jan. PMID 19073648, Free PMC Article
  2. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
  3. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  4. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_119012.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ammonium channel activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables ammonium channel activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables ammonium channel activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within ammonium transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
ammonium transporter 1;4
NP_194599.1
  • ammonium transporter 1;4 (AMT1;4); FUNCTIONS IN: ammonium transmembrane transporter activity, high affinity secondary active ammonium transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: leaf whorl, sepal, male gametophyte, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ammonium transporter (InterPro:IPR001905), Ammonium transporter, conserved site (InterPro:IPR018047); BEST Arabidopsis thaliana protein match is: ammonium transporter 1;1 (TAIR:AT4G13510.1); Has 11355 Blast hits to 11337 proteins in 2068 species: Archae - 224; Bacteria - 4683; Metazoa - 331; Fungi - 433; Plants - 496; Viruses - 0; Other Eukaryotes - 5188 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    14161594..14163342
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119012.2 → NP_194599.1  ammonium transporter 1;4 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194599.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q4PSH7, Q9SVT8
    UniProtKB/TrEMBL
    A0A178UUD8, A0A5S9XX64
    Conserved Domains (1) summary
    TIGR00836
    Location:52 → 478
    amt; ammonium transporter
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SVT8.1

Gene LinkOut

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