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Ribosomal protein S30 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829060, updated on 18-Sep-2024

Summary

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Official Full Name
Ribosomal protein S30 family protein
Primary source
TAIR:AT4G29390
Locus tag
AT4G29390
See related
Araport:AT4G29390
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17A13.210; F17A13_210
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (14464856..14466029, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene profilin 2 Neighboring gene O-Glycosyl hydrolases family 17 protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene protein kinase family protein / WD-40 repeat family protein Neighboring gene oxidoreductase/transition metal ion-binding protein (DUF3531) Neighboring gene Ribosomal L28e protein family Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. Pendle AF, et al. Mol Biol Cell, 2005 Jan. PMID 15496452, Free PMC Article
  2. Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Carroll AJ, et al. Mol Cell Proteomics, 2008 Feb. PMID 17934214
  3. Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Bach-Pages M, et al. Biomolecules, 2020 Apr 24. PMID 32344669, Free PMC Article
  4. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_119084.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
part_of cytosolic small ribosomal subunit HDA PubMed 
located_in nucleolus HDA PubMed 
located_in plasma membrane HDA PubMed 

General protein information

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Preferred Names
Ribosomal protein S30 family protein
NP_194668.1
  • Ribosomal protein S30 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S30 (InterPro:IPR006846); BEST Arabidopsis thaliana protein match is: Ribosomal protein S30 family protein (TAIR:AT5G56670.1); Has 682 Blast hits to 682 proteins in 246 species: Archae - 2; Bacteria - 0; Metazoa - 304; Fungi - 135; Plants - 106; Viruses - 1; Other Eukaryotes - 134 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    14464856..14466029 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119084.3 → NP_194668.1  Ribosomal protein S30 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194668.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O82203, P49689, Q9M0E4
    UniProtKB/TrEMBL
    A0A178V0S4, A0A384L8A2, Q0WWR7
    Conserved Domains (1) summary
    pfam04758
    Location:3 → 59
    Ribosomal_S30; Ribosomal protein S30
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P49689.3

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