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WRKY family transcription factor [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829309, updated on 18-Sep-2024

Summary

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Official Full Name
WRKY family transcription factor
Primary source
TAIR:AT4G31805
Locus tag
AT4G31805
See related
Araport:AT4G31805
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
POLAR; POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION
Summary
Encodes POLAR, a protein associated with cellular asymmetry of meristemoids. Its transcript levels change after inducing MUTE expression in a mute background.
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (15385280..15387097)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene WRKY DNA-binding protein 18 Neighboring gene ATP-dependent caseinolytic (Clp) protease/crotonase family protein Neighboring gene Phototropic-responsive NPH3 family protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cell type-specific attenuation of brassinosteroid signaling precedes stomatal asymmetric cell division. Kim EJ, et al. Proc Natl Acad Sci U S A, 2023 Sep 5. PMID 37639582, Free PMC Article
  2. Molecular profiling of stomatal meristemoids reveals new component of asymmetric cell division and commonalities among stem cell populations in Arabidopsis. Pillitteri LJ, et al. Plant Cell, 2011 Sep. PMID 21963668, Free PMC Article
  3. POLAR-guided signalling complex assembly and localization drive asymmetric cell division. Houbaert A, et al. Nature, 2018 Nov. PMID 30429609
  4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_119330.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular adaptor activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in asymmetric cell division IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in guard cell differentiation IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
WRKY family transcription factor
NP_567883.1
  • WRKY family transcription factor; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G10890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    15385280..15387097
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119330.3 → NP_567883.1  WRKY family transcription factor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567883.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q6NQ99
    UniProtKB/TrEMBL
    A0A5S9XY22
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6NQ99.1

Gene LinkOut

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