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Late embryogenesis abundant (LEA) protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829812, updated on 18-Sep-2024

Summary

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Official Full Name
Late embryogenesis abundant (LEA) protein
Primary source
TAIR:AT4G36600
Locus tag
AT4G36600
See related
Araport:AT4G36600
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AP22.17; AP22_17
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (17263564..17265172)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene AAA-type ATPase family protein Neighboring gene MADS-box transcription factor family protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene GATA transcription factor 19

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The intrinsically disordered protein LEA7 from Arabidopsis thaliana protects the isolated enzyme lactate dehydrogenase and enzymes in a soluble leaf proteome during freezing and drying. Popova AV, et al. Biochim Biophys Acta, 2015 Oct. PMID 25988244
  2. The ubiquitous distribution of late embryogenesis abundant proteins across cell compartments in Arabidopsis offers tailored protection against abiotic stress. Candat A, et al. Plant Cell, 2014 Jul. PMID 25005920, Free PMC Article
  3. Identification and dynamics of Arabidopsis adaptor protein-2 complex and its involvement in floral organ development. Yamaoka S, et al. Plant Cell, 2013 Aug. PMID 23975897, Free PMC Article
  4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The intrinsically disordered protein LEA7 from Arabidopsis thaliana has protective activity on a number of other Arabidopsis enzymes in vitro.
    Title: The intrinsically disordered protein LEA7 from Arabidopsis thaliana protects the isolated enzyme lactate dehydrogenase and enzymes in a soluble leaf proteome during freezing and drying.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_119823.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Late embryogenesis abundant (LEA) protein
NP_195378.5
  • Late embryogenesis abundant (LEA) protein; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 4 (InterPro:IPR004238); BEST Arabidopsis thaliana protein match is: late embryogenesis abundant domain-containing protein / LEA domain-containing protein (TAIR:AT2G18340.1); Has 1483 Blast hits to 893 proteins in 345 species: Archae - 4; Bacteria - 836; Metazoa - 93; Fungi - 47; Plants - 352; Viruses - 1; Other Eukaryotes - 150 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17263564..17265172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001342412.1 → NP_001329380.1  Late embryogenesis abundant (LEA) protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V558, A0A1P8B7I6

  2. NM_119823.6 → NP_195378.5  Late embryogenesis abundant (LEA) protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195378.5

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4JQF1, Q6NKU0
Nucleotide Protein
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Gene LinkOut

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