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PLP5 PATATIN-like protein 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829860, updated on 18-Sep-2024

Summary

Official Symbol
PLP5
Official Full Name
PATATIN-like protein 5
Primary source
TAIR:AT4G37060
Locus tag
AT4G37060
See related
Araport:AT4G37060
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AP22.93; AP22_93; AtPLAIVB; PATATIN-like protein 5; phospholipase A IVB; PLA IVB
Summary
Patatin-related phospholipase A. Expressed weakly in roots, cotyledons, and leaves but is transcriptionally induced by auxin. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity.
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Genomic context

See PLP5 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Sequence:
Chromosome: 4; NC_003075.7 (17461366..17463961, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene methionine aminopeptidase 1D Neighboring gene PATATIN-like protein 4 Neighboring gene Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein Neighboring gene ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547)

Pathways from PubChem

General gene information

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables monoacylglycerol lipase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables phospholipase activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in lateral root formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
PATATIN-like protein 5
NP_001190942.2
  • PATATIN-like protein 5 (PLP5); FUNCTIONS IN: phospholipase activity, nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root, leaf; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2).
NP_195423.1
  • PATATIN-like protein 5 (PLP5); FUNCTIONS IN: phospholipase activity, nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root, leaf; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein (TAIR:AT4G37070.2); Has 2144 Blast hits to 2133 proteins in 387 species: Archae - 0; Bacteria - 506; Metazoa - 233; Fungi - 187; Plants - 895; Viruses - 0; Other Eukaryotes - 323 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17461366..17463961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001204013.1NP_001190942.2  PATATIN-like protein 5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V072, A0A5S9XZS2, F4JR91
  2. NM_119869.2NP_195423.1  PATATIN-like protein 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195423.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23180
    UniProtKB/TrEMBL
    A0A178V072, A0A5S9XZS2, A0A654FWB0
    Conserved Domains (1) summary
    cd07214
    Location:16366
    Pat17_isozyme_like; Patatin-like phospholipase of plants