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ELI3-1 cinnamyl alcohol dehydrogenase 7 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829954, updated on 18-Sep-2024

Summary

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Official Symbol
ELI3-1
Official Full Name
cinnamyl alcohol dehydrogenase 7
Primary source
TAIR:AT4G37980
Locus tag
AT4G37980
See related
Araport:AT4G37980
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCAD7; CAD7; CINNAMYL-ALCOHOL DEHYDROGENASE 7; ELI3; ELICITOR-ACTIVATED GENE 3; elicitor-activated gene 3-1; F20D10.100; F20D10_100
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Genomic context

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See ELI3-1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (17852441..17854608)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Rhamnogalacturonate lyase family protein Neighboring gene cinnamyl alcohol dehydrogenase 6 Neighboring gene cinnamyl alcohol dehydrogenase 8 Neighboring gene uncharacterized protein Neighboring gene DNA binding with one finger 4.7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a Hexenal Reductase That Modulates the Composition of Green Leaf Volatiles. Tanaka T, et al. Plant Physiol, 2018 Oct. PMID 30126866, Free PMC Article
  2. Rapid activation of a novel plant defense gene is strictly dependent on the Arabidopsis RPM1 disease resistance locus. Kiedrowski S, et al. EMBO J, 1992 Dec. PMID 1464303, Free PMC Article
  3. Expression of cinnamyl alcohol dehydrogenases and their putative homologues during Arabidopsis thaliana growth and development: lessons for database annotations? Kim SJ, et al. Phytochemistry, 2007 Jul. PMID 17467016
  4. Functional reclassification of the putative cinnamyl alcohol dehydrogenase multigene family in Arabidopsis. Kim SJ, et al. Proc Natl Acad Sci U S A, 2004 Feb 10. PMID 14745009, Free PMC Article
  5. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001036728.2
NM_119959.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables cinnamyl-alcohol dehydrogenase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables cinnamyl-alcohol dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within green leaf volatile biosynthetic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in lignin biosynthetic process IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within plant-type hypersensitive response IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within response to bacterium IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane HDA PubMed 

General protein information

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Preferred Names
cinnamyl alcohol dehydrogenase 7
NP_001031805.1
  • elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink).
NP_195511.1
  • elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 39128 Blast hits to 39104 proteins in 3053 species: Archae - 813; Bacteria - 26065; Metazoa - 1241; Fungi - 2911; Plants - 3099; Viruses - 3; Other Eukaryotes - 4996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17852441..17854608
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119959.4 → NP_195511.1  cinnamyl alcohol dehydrogenase 7 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195511.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B9DG76, O65622, Q02971, Q53ZN3, Q9SZJ9
    UniProtKB/TrEMBL
    A0A178V3X8, A0A5S9Y020, C0Z2U0
    Conserved Domains (1) summary
    PLN02586
    Location:1 → 355
    PLN02586; probable cinnamyl alcohol dehydrogenase

  2. NM_001036728.2 → NP_001031805.1  cinnamyl alcohol dehydrogenase 7 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031805.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    C0Z2U0
    Conserved Domains (1) summary
    cd05283
    Location:10 → 296
    CAD1; Cinnamyl alcohol dehydrogenases (CAD)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q02971.2

Gene LinkOut

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