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3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830331, updated on 18-Sep-2024

Summary

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Official Full Name
3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455)
Primary source
TAIR:AT5G04520
Locus tag
AT5G04520
See related
Araport:AT5G04520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T32M21.120; T32M21_120
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (1289885..1291104, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene phytol kinase 1 VTE5 Neighboring gene glycosyltransferase family protein 47 Neighboring gene 3'-phosphoinositide-dependent protein kinase 1 Neighboring gene 3-ketoacyl-CoA synthase 19 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_120534.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455)
NP_196072.1
  • Protein of unknown function DUF455; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF455 (InterPro:IPR007402), Protein of unknown function UCP012318 (InterPro:IPR011197); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF455 (TAIR:AT1G06240.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    1289885..1291104 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120534.2 → NP_196072.1  3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196072.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UQQ1, A0A5S9Y1C7, Q9LZ73
    Conserved Domains (1) summary
    pfam04305
    Location:15 → 282
    DUF455; Protein of unknown function (DUF455)
Nucleotide Protein
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