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LBD33 LOB domain-containing protein 33 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830495, updated on 18-Sep-2024

Summary

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Official Symbol
LBD33
Official Full Name
LOB domain-containing protein 33
Primary source
TAIR:AT5G06080
Locus tag
AT5G06080
See related
Araport:AT5G06080
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K16F4.4; K16F4_4; LOB domain-containing protein 33
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Genomic context

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See LBD33 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (1830671..1831467, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Putative methyltransferase family protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene C2H2 and C2HC zinc fingers superfamily protein Neighboring gene glycerol-3-phosphate acyltransferase 7 Neighboring gene myb domain protein 33

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Auxin-dependent cell cycle reactivation through transcriptional regulation of Arabidopsis E2Fa by lateral organ boundary proteins. Berckmans B, et al. Plant Cell, 2011 Oct. PMID 22003076, Free PMC Article
  2. ZmMS1/ZmLBD30-orchestrated transcriptional regulatory networks precisely control pollen exine development. Hou Q, et al. Mol Plant, 2023 Aug 7. PMID 37501369
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. E2Fa expression is regulated by the LATERAL ORGAN BOUNDARY DOMAIN18/LATERAL ORGAN BOUNDARY DOMAIN33 (LBD18/LBD33) dimer that is, in turn, regulated by the auxin signaling pathway.
    Title: Auxin-dependent cell cycle reactivation through transcriptional regulation of Arabidopsis E2Fa by lateral organ boundary proteins.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription activator activity IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
LOB domain-containing protein 33
NP_196226.1
  • LOB domain-containing protein 33 (LBD33); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: lateral organ boundaries-domain 29 (TAIR:AT3G58190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    1830671..1831467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120690.5 → NP_196226.1  LOB domain-containing protein 33 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196226.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B7XG78, Q9LHS8
    UniProtKB/TrEMBL
    A0A178UJQ4, A0A5S9Y2I8
    Conserved Domains (1) summary
    pfam03195
    Location:7 → 106
    LOB; Lateral organ boundaries (LOB) domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LHS8.1

Gene LinkOut

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