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ABCG22 ABC-2 type transporter family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830541, updated on 18-Sep-2024

Summary

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Official Symbol
ABCG22
Official Full Name
ABC-2 type transporter family protein
Primary source
TAIR:AT5G06530
Locus tag
AT5G06530
See related
Araport:AT5G06530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
Arabidopsis thaliana ATP-binding cassette G22; AtABCG22; ATP-binding cassette G22; F15M7.6; F15M7_6
Summary
Encodes ABCG22, an ABC transporter gene. Mutation results in increased water transpiration and drought susceptibility.
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Genomic context

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See ABCG22 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Sequence:
Chromosome: 5; NC_003076.8 (1989650..1994961, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene nuclear factor Y, subunit A10 Neighboring gene SWAP (Suppressor-of-White-APricot)/surp domain-containing protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene transferring glycosyl group transferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional relationship of AtABCG21 and AtABCG22 in stomatal regulation. Kuromori T, et al. Sci Rep, 2017 Oct 2. PMID 28970576, Free PMC Article
  2. Arabidopsis mutants of AtABCG22, an ABC transporter gene, increase water transpiration and drought susceptibility. Kuromori T, et al. Plant J, 2011 Sep. PMID 21575091
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001036766.2
NM_001342884.1
NM_120736.3
NM_180450.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables ATPase-coupled transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to water deprivation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within transpiration IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ABC-2 type transporter family protein
NP_001031843.1
  • ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 401964 Blast hits to 364471 proteins in 4136 species: Archae - 7187; Bacteria - 315702; Metazoa - 9377; Fungi - 6648; Plants - 5639; Viruses - 7; Other Eukaryotes - 57404 (source: NCBI BLink).
NP_568169.1
  • ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_850781.2
  • ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G52310.1); Has 406769 Blast hits to 368814 proteins in 4158 species: Archae - 7190; Bacteria - 320402; Metazoa - 9392; Fungi - 6664; Plants - 5687; Viruses - 7; Other Eukaryotes - 57427 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    1989650..1994961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120736.3 → NP_568169.1  ABC-2 type transporter family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568169.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q93YS4, Q94EX0, Q9FG17
    UniProtKB/TrEMBL
    A0A654FYZ0, A0A7G2FCT2, B9DH73
    Conserved Domains (1) summary
    PLN03211
    Location:112 → 748
    PLN03211; ABC transporter G-25; Provisional

  2. NM_001036766.2 → NP_001031843.1  ABC-2 type transporter family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031843.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2FCT2
    Conserved Domains (3) summary
    COG1131
    Location:176 → 457
    CcmA; ABC-type multidrug transport system, ATPase component [Defense mechanisms]
    pfam01061
    Location:503 → 679
    ABC2_membrane; ABC-2 type transporter
    cl21455
    Location:176 → 385
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  3. NM_001342884.1 → NP_001330485.1  ABC-2 type transporter family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BAZ0

  4. NM_180450.2 → NP_850781.2  ABC-2 type transporter family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850781.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q93YS4, Q94EX0, Q9FG17
    UniProtKB/TrEMBL
    A0A654FYZ0, A0A7G2FCT2, B9DH73
    Conserved Domains (1) summary
    PLN03211
    Location:112 → 748
    PLN03211; ABC transporter G-25; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q93YS4.1

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