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EML2 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830567, updated on 18-Sep-2024

Summary

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Official Symbol
EML2
Official Full Name
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
Primary source
TAIR:AT5G06780
Locus tag
AT5G06780
See related
Araport:AT5G06780
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtEML2; EMSY-like 2; MPH15.14; MPH15_14
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Genomic context

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See EML2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Sequence:
Chromosome: 5; NC_003076.8 (2093883..2097239, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Late Embryogenesis Abundant 4-5 Neighboring gene KH domain-containing protein / zinc finger (CCCH type) family protein Neighboring gene cotton fiber protein Neighboring gene myb-like HTH transcriptional regulator family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proteolytic Processing of Plant Proteins by Potyvirus NIa Proteases. Xiao H, et al. J Virol, 2022 Jan 26. PMID 34757836, Free PMC Article
  2. EMSY-like genes are required for full RPP7-mediated race-specific immunity and basal defense in Arabidopsis. Tsuchiya T, et al. Mol Plant Microbe Interact, 2011 Dec. PMID 21830950
  3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001203313.1
NM_120761.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to fungus IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in defense response to virus IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in response to heat IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in vegetative to reproductive phase transition of meristem IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
NP_001190242.1
  • Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein (TAIR:AT3G12140.2).
NP_196296.1
  • Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; CONTAINS InterPro DOMAIN/s: ENT (InterPro:IPR005491), Tudor-like, plant (InterPro:IPR014002); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein (TAIR:AT3G12140.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    2093883..2097239 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203313.1 → NP_001190242.1  Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190242.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LE93, Q9FG29
    UniProtKB/TrEMBL
    A0A178UCC8, A0A5S9Y206, A0A7G2F641
    Conserved Domains (2) summary
    pfam03735
    Location:4 → 69
    ENT; ENT domain
    cd20404
    Location:129 → 179
    Tudor_Agenet_AtEML-like; Tudor-like Agenet domain found in Arabidopsis thaliana proteins EMSY-LIKE 1-4 (AtEML1-4) and similar proteins

  2. NM_120761.5 → NP_196296.1  Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196296.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2F641
    Conserved Domains (2) summary
    pfam03735
    Location:11 → 76
    ENT; ENT domain
    cd20404
    Location:136 → 186
    Tudor_Agenet_AtEML-like; Tudor-like Agenet domain found in Arabidopsis thaliana proteins EMSY-LIKE 1-4 (AtEML1-4) and similar proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FG29.2

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