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AAP2 amino acid permease 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830781, updated on 18-Sep-2024

Summary

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Official Symbol
AAP2
Official Full Name
amino acid permease 2
Primary source
TAIR:AT5G09220
Locus tag
AT5G09220
See related
Araport:AT5G09220
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
amino acid permease 2; T2K12.6
Summary
member of AAAP family
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Genomic context

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See AAP2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Sequence:
Chromosome: 5; NC_003076.8 (2866222..2869156)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene GC-rich sequence DNA-binding factor-like protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene sirtuin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Altered xylem-phloem transfer of amino acids affects metabolism and leads to increased seed yield and oil content in Arabidopsis. Zhang L, et al. Plant Cell, 2010 Nov. PMID 21075769, Free PMC Article
  2. Differential expression of two related amino acid transporters with differing substrate specificity in Arabidopsis thaliana. Kwart M, et al. Plant J, 1993 Dec. PMID 8281191
  3. Substrate specificity and expression profile of amino acid transporters (AAPs) in Arabidopsis. Fischer WN, et al. J Biol Chem, 1995 Jul 7. PMID 7608199
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_120958.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables amino acid transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within acidic amino acid transport IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within amino acid transmembrane transport IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within amino acid transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within neutral amino acid transport IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within phloem loading IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
amino acid permease 2
NP_196484.1
  • amino acid permease 2 (AAP2); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 4 (TAIR:AT5G63850.1); Has 2701 Blast hits to 2684 proteins in 226 species: Archae - 0; Bacteria - 6; Metazoa - 573; Fungi - 420; Plants - 1375; Viruses - 0; Other Eukaryotes - 327 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    2866222..2869156
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120958.3 → NP_196484.1  amino acid permease 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196484.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q38967, Q8LFS8
    UniProtKB/TrEMBL
    A0A178UHC5, A0A5S9Y2X8
    Conserved Domains (1) summary
    pfam01490
    Location:46 → 481
    Aa_trans; Transmembrane amino acid transporter protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q38967.1

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