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EXL4 EXORDIUM like 4 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830803, updated on 18-Sep-2024

Summary

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Official Symbol
EXL4
Official Full Name
EXORDIUM like 4
Primary source
TAIR:AT5G09440
Locus tag
AT5G09440
See related
Araport:AT5G09440
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
EXORDIUM like 4; T5E8.240; T5E8_240
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Genomic context

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See EXL4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (2938193..2939715)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ethylene induced calmodulin binding protein Neighboring gene translocon at the outer membrane of chloroplasts 64-V Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The extracellular lipase EXL4 is required for efficient hydration of Arabidopsis pollen. Updegraff EP, et al. Sex Plant Reprod, 2009 Sep. PMID 20033440
  2. An Arabidopsis (malectin-like) leucine-rich repeat receptor-like kinase contributes to downy mildew disease. Hok S, et al. Plant Cell Environ, 2011 Nov. PMID 21711359
  3. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  4. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. EXL4 is required for efficient hydration of pollen.
    Title: The extracellular lipase EXL4 is required for efficient hydration of Arabidopsis pollen.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_120981.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to oomycetes IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
EXORDIUM like 4
NP_196506.1
  • EXORDIUM like 4 (EXL4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 2 (TAIR:AT5G64260.1); Has 396 Blast hits to 396 proteins in 24 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    2938193..2939715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120981.3 → NP_196506.1  EXORDIUM like 4 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196506.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FY71
    UniProtKB/TrEMBL
    A0A178UJ96, A0A5S9Y3E1, A0A654G016
    Conserved Domains (1) summary
    pfam04674
    Location:33 → 277
    Phi_1; Phosphate-induced protein 1 conserved region
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FY71.1

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