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ACT7 actin 7 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830841, updated on 18-Sep-2024

Summary

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Official Symbol
ACT7
Official Full Name
actin 7
Primary source
TAIR:AT5G09810
Locus tag
AT5G09810
See related
Araport:AT5G09810
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ACT2; actin 2; actin 7; AtACT7; MYH9.2; MYH9_2
Summary
Member of Actin gene family.Mutants are defective in germination and root growth.
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Genomic context

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See ACT7 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (3052062..3054691)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ARM repeat superfamily protein Neighboring gene inflorescence deficient in abscission (IDA)-like 3 Neighboring gene Plastid-lipid associated protein PAP / fibrillin family protein Neighboring gene BolA-like family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The arabidopsis ACT7 actin gene is expressed in rapidly developing tissues and responds to several external stimuli. McDowell JM, et al. Plant Physiol, 1996 Jul. PMID 8754679, Free PMC Article
  2. One plant actin isovariant, ACT7, is induced by auxin and required for normal callus formation. Kandasamy MK, et al. Plant Cell, 2001 Jul. PMID 11449050, Free PMC Article
  3. Arabidopsis actin gene ACT7 plays an essential role in germination and root growth. Gilliland LU, et al. Plant J, 2003 Jan. PMID 12535345
  4. Arabidopsis vegetative actin isoforms, AtACT2 and AtACT7, generate distinct filament arrays in living plant cells. Kijima ST, et al. Sci Rep, 2018 Mar 12. PMID 29531328, Free PMC Article
  5. The Arabidopsis ARCP protein, CSI1, which is required for microtubule stability, is necessary for root and anther development. Mei Y, et al. Plant Cell, 2012 Mar. PMID 22427339, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. different actin isoforms (ACT2 and ACT7) are capable of constructing unique filament arrays, depending on the cell type or tissue.
    Title: Arabidopsis vegetative actin isoforms, AtACT2 and AtACT7, generate distinct filament arrays in living plant cells.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

NM_121018.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables structural constituent of cytoskeleton ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi to plasma membrane transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within cell division IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within cytoskeleton organization TAS
Traceable Author Statement
more info
  
involved_in protein localization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to auxin IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to light stimulus IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to wounding IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within root development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within root epidermal cell differentiation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within root hair elongation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within seed germination IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope HDA PubMed 
located_in chloroplast stroma HDA PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytoskeleton ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
located_in cytosol HDA PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion HDA PubMed 
located_in nucleolus HDA PubMed 
located_in plant-type cell wall HDA PubMed 
located_in plasma membrane HDA PubMed 
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
actin 7
NP_196543.1
  • actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3052062..3054691
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121018.4 → NP_196543.1  actin 7 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196543.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P53492, P53495
    UniProtKB/TrEMBL
    A0A178UEW4, A0A5S9Y341, F1LIM0
    Conserved Domains (1) summary
    cl17037
    Location:5 → 377
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P53492.1

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