U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

inactive rhomboid protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831133, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
inactive rhomboid protein
Primary source
TAIR:AT5G12930
Locus tag
AT5G12930
See related
Araport:AT5G12930
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T24H18.90; T24H18_90
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
6
Sequence:
Chromosome: 5; NC_003076.8 (4082890..4085376, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DNA double-strand break repair RAD50 ATPase Neighboring gene Histone superfamily protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene proline-tRNA ligase (DUF1680)

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

NM_121296.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
inactive rhomboid protein
NP_196797.1
  • unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    4082890..4085376 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121296.4 → NP_196797.1  inactive rhomboid protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196797.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178U8W6, A0A5S9Y3L8, Q9LXU6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools