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ABCI11 non-intrinsic ABC protein 14 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831259, updated on 18-Sep-2024

Summary

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Official Symbol
ABCI11
Official Full Name
non-intrinsic ABC protein 14
Primary source
TAIR:AT5G14100
Locus tag
AT5G14100
See related
Araport:AT5G14100
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANANON-INTRINSIC ABC PROTEIN 14; ATNAP14; ATP-binding cassette I11; MUA22.10; MUA22_10; NAP14; non-intrinsic ABC protein 14
Summary
member of NAP subfamily
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Genomic context

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See ABCI11 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Sequence:
Chromosome: 5; NC_003076.8 (4549438..4551843, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Thioredoxin superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene regulator of nonsense transcript protein Neighboring gene uncharacterized protein Neighboring gene peroxidase (DUF 3339)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Disruption of Nap14, a plastid-localized non-intrinsic ABC protein in Arabidopsis thaliana results in the over-accumulation of transition metals and in aberrant chloroplast structures. Shimoni-Shor E, et al. Plant Cell Environ, 2010 Jun. PMID 20132520
  2. A Novel Prokaryote-Type ECF/ABC Transporter Module in Chloroplast Metal Homeostasis. Voith von Voithenberg L, et al. Front Plant Sci, 2019. PMID 31736987, Free PMC Article
  3. The Arabidopsis thaliana ABC protein superfamily, a complete inventory. Sánchez-Fernández R, et al. J Biol Chem, 2001 Aug 10. PMID 11346655
  4. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
  5. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. AtNAP14 plays an important role in plastid transition metal homeostasis. [Nap14]
    Title: Disruption of Nap14, a plastid-localized non-intrinsic ABC protein in Arabidopsis thaliana results in the over-accumulation of transition metals and in aberrant chloroplast structures.
Submit: New GeneRIF Correction

General gene information

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Homology

NM_121413.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within chloroplast organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within multicellular organismal-level iron ion homeostasis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast envelope HDA PubMed 
located_in chloroplast inner membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
non-intrinsic ABC protein 14
NP_196914.1
  • non-intrinsic ABC protein 14 (NAP14); FUNCTIONS IN: transporter activity; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT4G33460.1); Has 403186 Blast hits to 364909 proteins in 4058 species: Archae - 7357; Bacteria - 322932; Metazoa - 7473; Fungi - 4759; Plants - 4437; Viruses - 20; Other Eukaryotes - 56208 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    4549438..4551843 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121413.2 → NP_196914.1  non-intrinsic ABC protein 14 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196914.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LEF6, Q9FMU0
    UniProtKB/TrEMBL
    A0A178UMS8, A0A178UPT9, A0A5S9Y3Y4
    Conserved Domains (1) summary
    cd03225
    Location:52 → 268
    ABC_cobalt_CbiO_domain1; First domain of the ATP-binding cassette component of cobalt transport system
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8LEF6.1

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