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BCCP2 biotin carboxyl carrier protein 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831406, updated on 18-Sep-2024

Summary

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Official Symbol
BCCP2
Official Full Name
biotin carboxyl carrier protein 2
Primary source
TAIR:AT5G15530
Locus tag
AT5G15530
See related
Araport:AT5G15530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
biotin carboxyl carrier protein 2; BIOTIN CARBOXYL-CARRIER PROTEIN; CAC1-B; T20K14.140; T20K14_140
Summary
biotin carboxyl carrier protein isoform 2 (BCCP2) mRNA
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Genomic context

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See BCCP2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Sequence:
Chromosome: 5; NC_003076.8 (5038563..5040840)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Ankyrin repeat family protein Neighboring gene TPX2 (targeting protein for Xklp2) protein family Neighboring gene Ribosomal protein S19e family protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Reverse-genetic analysis of the two biotin-containing subunit genes of the heteromeric acetyl-coenzyme A carboxylase in Arabidopsis indicates a unidirectional functional redundancy. Li X, et al. Plant Physiol, 2011 Jan. PMID 21030508, Free PMC Article
  2. Design of a Seed-Specific Chimeric Promoter with a Modified Expression Profile to Improve Seed Oil Content. Aoyagi T, et al. Int J Mol Sci, 2018 Jun 5. PMID 29874815, Free PMC Article
  3. Brassicaceae express multiple isoforms of biotin carboxyl carrier protein in a tissue-specific manner. Thelen JJ, et al. Plant Physiol, 2001 Apr. PMID 11299381, Free PMC Article
  4. Chloroplast acetyl-CoA carboxylase activity is 2-oxoglutarate-regulated by interaction of PII with the biotin carboxyl carrier subunit. Feria Bourrellier AB, et al. Proc Natl Acad Sci U S A, 2010 Jan 5. PMID 20018655, Free PMC Article
  5. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. We constructed a chimeric promoter that starts to express in the early stage of seed development, and high-level expression is retained until the later stage by connecting the promoters of the biotin carboxyl carrier protein 2 (BCCP2) gene encoding the BCCP2 subunit of acetyl-CoA carboxylase and the fatty acid elongase 1 (FAE1) gene from Arabidopsis
    Title: Design of a Seed-Specific Chimeric Promoter with a Modified Expression Profile to Improve Seed Oil Content.
  2. BCCP1 protein can compensate for the lack of BCCP2, the absence of BCCP1 cannot be tolerated as BCCP2 levels are not sufficient to support heteromeric acetyl-coenzyme A carboxylase activity at a level that is required for normal growth and development.
    Title: Reverse-genetic analysis of the two biotin-containing subunit genes of the heteromeric acetyl-coenzyme A carboxylase in Arabidopsis indicates a unidirectional functional redundancy.
Submit: New GeneRIF Correction

General gene information

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Homology

NM_121557.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables acetyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
  
enables biotin binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of acetyl-CoA carboxylase complex IEA
Inferred from Electronic Annotation
more info
  
located_in chloroplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast envelope HDA PubMed 
located_in chloroplast stroma HDA PubMed 

General protein information

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Preferred Names
biotin carboxyl carrier protein 2
NP_568316.1
  • biotin carboxyl carrier protein 2 (BCCP2); FUNCTIONS IN: biotin binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Biotin-binding site (InterPro:IPR001882), Single hybrid motif (InterPro:IPR011053), Acetyl-CoA biotin carboxyl carrier (InterPro:IPR001249), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: chloroplastic acetylcoenzyme A carboxylase 1 (TAIR:AT5G16390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    5038563..5040840
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121557.4 → NP_568316.1  biotin carboxyl carrier protein 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568316.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LF29, Q9LLC1
    UniProtKB/TrEMBL
    A0A178U9S1, A0A5S9Y4N9, A0A7G2F8L8
    Conserved Domains (1) summary
    PLN02983
    Location:1 → 255
    PLN02983; biotin carboxyl carrier protein of acetyl-CoA carboxylase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LLC1.1

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