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tRNA (guanine(26)-N(2))-dimethyltransferase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831438, updated on 18-Sep-2024

Summary

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Official Full Name
tRNA (guanine(26)-N(2))-dimethyltransferase
Primary source
TAIR:AT5G15810
Locus tag
AT5G15810
See related
Araport:AT5G15810
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14F8.190; F14F8_190
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Genomic context

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Location:
chromosome: 5
Exon count:
12
Sequence:
Chromosome: 5; NC_003076.8 (5157841..5161363)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene chaperone Neighboring gene tRNA-Ile Neighboring gene tRNA-Asp Neighboring gene RING/U-box superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of the enzymes responsible for m2,2G and acp3U formation on cytosolic tRNA from insects and plants. Funk HM, et al. PLoS One, 2020. PMID 33253256, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_121586.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables tRNA (guanine(10)-N2)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables tRNA (guanine(26)-N2)-dimethyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within tRNA modification IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
tRNA (guanine(26)-N(2))-dimethyltransferase
NP_197085.3
  • N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT3G02320.1); Has 1017 Blast hits to 963 proteins in 359 species: Archae - 255; Bacteria - 70; Metazoa - 198; Fungi - 150; Plants - 103; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    5157841..5161363
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121586.3 → NP_197085.3  tRNA (guanine(26)-N(2))-dimethyltransferase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4KB92, Q8RXS4, Q9LFU5
    UniProtKB/TrEMBL
    A0A5S9Y563, A0A654G221
    Conserved Domains (1) summary
    cl17173
    Location:10 → 466
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LFU5.3

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