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UGT78D2 UDP-glucosyl transferase 78D2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831568, updated on 18-Sep-2024

Summary

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Official Symbol
UGT78D2
Official Full Name
UDP-glucosyl transferase 78D2
Primary source
TAIR:AT5G17050
Locus tag
AT5G17050
See related
Araport:AT5G17050
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F2K13.200; F2K13_200; UDP-glucosyl transferase 78D2
Summary
The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.
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Genomic context

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See UGT78D2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (5607788..5609589, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene UDP-glucosyl transferase 78D3 Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene ADP-ribosylation factor B1B Neighboring gene serine/threonine-protein phosphatase 4 regulatory subunit-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Glycoside-specific metabolomics combined with precursor isotopic labeling for characterizing plant glycosyltransferases. Wu J, et al. Mol Plant, 2022 Oct 3. PMID 35996753
  2. Anthocyaninless1 gene of Arabidopsis thaliana encodes a UDP-glucose:flavonoid-3-O-glucosyltransferase. Kubo H, et al. J Plant Res, 2007 May. PMID 17277900
  3. Engineering flavonoid glycosyltransferases for enhanced catalytic efficiency and extended sugar-donor selectivity. Kim HS, et al. Planta, 2013 Oct. PMID 23801300
  4. Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor. Tohge T, et al. Plant J, 2005 Apr. PMID 15807784
  5. The activity of Arabidopsis glycosyltransferases toward salicylic acid, 4-hydroxybenzoic acid, and other benzoates. Lim EK, et al. J Biol Chem, 2002 Jan 4. PMID 11641410

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. First report on the construction of fusion proteins with expanded sugar-donor range and enhanced catalytic efficiencies for sugar donors.
    Title: Engineering flavonoid glycosyltransferases for enhanced catalytic efficiency and extended sugar-donor selectivity.
  2. ANL1 gene encodes UDP-glucose:flavonoid-3-O-glucosyltransferase and is expressed in all tissues examined, including rosette leaves, stems, flower buds and roots. Anthocyaninless1] [ANL1]
    Title: Anthocyaninless1 gene of Arabidopsis thaliana encodes a UDP-glucose:flavonoid-3-O-glucosyltransferase.
  3. Two putative glycosyltransferase genes (At5g17050 and At4g14090) induced by PAP1 expression were confirmed to encode flavonoid 3-O-glucosyltransferase and anthocyanin 5-O-glucosyltransferase, respectively. [flavonoid 3-O-glucosyltransferase]
    Title: Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

NM_121711.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables anthocyanidin 3-O-glucosyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables flavonol 3-O-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables quercetin 3-O-glucosyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in coumarin biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
UDP-glucosyl transferase 78D2
NP_197207.1
  • UDP-glucosyl transferase 78D2 (UGT78D2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    5607788..5609589 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121711.5 → NP_197207.1  UDP-glucosyl transferase 78D2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197207.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LFJ8
    UniProtKB/TrEMBL
    A0A178U9P1, A0A384L9K8, A0A654G1Q4, W8PUE7
    Conserved Domains (1) summary
    cd03784
    Location:12 → 438
    GT1_Gtf-like; UDP-glycosyltransferases and similar proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LFJ8.1

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