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ASG1 nuclear factor 1 A-type protein (DUF1005) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831630, updated on 18-Sep-2024

Summary

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Official Symbol
ASG1
Official Full Name
nuclear factor 1 A-type protein (DUF1005)
Primary source
TAIR:AT5G17640
Locus tag
AT5G17640
See related
Araport:AT5G17640
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
Abiotic Stress Gene 1; K10A8.120; K10A8_120
Summary
Expression of this gene is induced by abscisic acid and salt stress.
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Genomic context

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See ASG1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (5810935..5813316, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene nuclear matrix protein Neighboring gene Nucleotide/sugar transporter family protein Neighboring gene ncRNA Neighboring gene glycine/proline-rich protein Neighboring gene tRNA (guanine-N-7) methyltransferase Neighboring gene alpha/beta-Hydrolases superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Asg1 is a stress-inducible gene which increases stomatal resistance in salt stressed potato. Batelli G, et al. J Plant Physiol, 2012 Dec 15. PMID 22854180, Free PMC Article
  2. The Arabidopsis Proteins AtNHR2A and AtNHR2B Are Multi-Functional Proteins Integrating Plant Immunity With Other Biological Processes. Singh R, et al. Front Plant Sci, 2020. PMID 32194606, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_121770.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to abscisic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to salt stress IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
nuclear factor 1 A-type protein (DUF1005)
NP_197266.1
  • Protein of unknown function (DUF1005); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1005 (InterPro:IPR010410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1005) (TAIR:AT1G10020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    5810935..5813316 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121770.4 → NP_197266.1  nuclear factor 1 A-type protein (DUF1005) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197266.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178U8X6, A0A5S9Y5L1, Q9LF60
    Conserved Domains (1) summary
    pfam06219
    Location:1 → 418
    DUF1005; Protein of unknown function (DUF1005)
Nucleotide Protein
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