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Low-density receptor-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832003, updated on 18-Sep-2024

Summary

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Official Full Name
Low-density receptor-like protein
Primary source
TAIR:AT5G18850
Locus tag
AT5G18850
See related
Araport:AT5G18850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17K4.100; F17K4_100
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (6286732..6287629)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene TCP-1/cpn60 chaperonin family protein Neighboring gene squamosa promoter binding protein-like 7 Neighboring gene Major facilitator superfamily protein Neighboring gene inosine-uridine preferring nucleoside hydrolase family protein Neighboring gene Inosine-uridine preferring nucleoside hydrolase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_121890.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in Golgi trans cisterna HDA PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Low-density receptor-like protein
NP_197386.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    6286732..6287629
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121890.4 → NP_197386.1  Low-density receptor-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197386.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UBS1, Q0WRT5, Q6NLF5
Nucleotide Protein
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