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CAM6 calmodulin 6 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832245, updated on 18-Sep-2024

Summary

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Official Symbol
CAM6
Official Full Name
calmodulin 6
Primary source
TAIR:AT5G21274
Locus tag
AT5G21274
See related
Araport:AT5G21274
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ACAM-6; calmodulin 6
Summary
Encodes a calmodulin isoform. Expressed in leaves.
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Genomic context

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See CAM6 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (7214474..7216052, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene 5'-AMP-activated protein kinase beta-2 subunit protein Neighboring gene protein kinase family protein Neighboring gene Ca2+regulated serine-threonine protein kinase family protein Neighboring gene tRNA-Asp

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Calmodulin isoforms in Arabidopsis encoded by multiple divergent mRNAs. Gawienowski MC, et al. Plant Mol Biol, 1993 May. PMID 8507825
  2. An IQ domain mediates the interaction with calmodulin in a plant cyclic nucleotide-gated channel. Fischer C, et al. Plant Cell Physiol, 2013 Apr. PMID 23385145, Free PMC Article
  3. Interaction of a kinesin-like protein with calmodulin isoforms from Arabidopsis. Reddy VS, et al. J Biol Chem, 1999 Oct 29. PMID 10531384
  4. A novel family of Ca2+/calmodulin-binding proteins involved in transcriptional regulation: interaction with fsh/Ring3 class transcription activators. Du L, et al. Plant Mol Biol, 2004 Mar. PMID 15316289
  5. The N-coil and the globular N-terminal domain of plant ARGONAUTE1 are interaction hubs for regulatory factors. Bressendorff S, et al. Biochem J, 2023 Jul 12. PMID 37278687

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_180529.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calcium ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within calcium-mediated signaling TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
NOT located_in cytosol RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in intracellular anatomical structure TAS
Traceable Author Statement
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plastid HDA PubMed 

General protein information

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Preferred Names
calmodulin 6
NP_850860.1
  • calmodulin 6 (CAM6); FUNCTIONS IN: calcium ion binding; INVOLVED IN: calcium-mediated signaling; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell, leaf; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3); Has 34463 Blast hits to 23268 proteins in 1758 species: Archae - 4; Bacteria - 213; Metazoa - 14512; Fungi - 7798; Plants - 6959; Viruses - 0; Other Eukaryotes - 4977 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    7214474..7216052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_180529.4 → NP_850860.1  calmodulin 6 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850860.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q03509
    UniProtKB/TrEMBL
    A0A178UHI2, A0A5S9Y6G5, A8Y7S8
    Conserved Domains (1) summary
    PTZ00184
    Location:1 → 149
    PTZ00184; calmodulin; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q03509.2

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