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Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832301, updated on 18-Sep-2024

Summary

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Official Full Name
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Primary source
TAIR:AT5G22400
Locus tag
AT5G22400
See related
Araport:AT5G22400
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MWD9.20; MWD9_20
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Genomic context

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Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (7422670..7425574, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene FANTASTIC four-like protein (DUF3049) Neighboring gene ncRNA Neighboring gene root hair specific 18 Neighboring gene fatty acid reductase 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ROPGAPs of Arabidopsis limit susceptibility to powdery mildew. Huesmann C, et al. Plant Signal Behav, 2011 Nov. PMID 22067988, Free PMC Article
  2. Arabidopsis RopGAPs are a novel family of rho GTPase-activating proteins that require the Cdc42/Rac-interactive binding motif for rop-specific GTPase stimulation. Wu G, et al. Plant Physiol, 2000 Dec. PMID 11115880, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_122145.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
NP_197632.1
  • Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: rac GTPase activating protein (TAIR:AT3G11490.1); Has 3977 Blast hits to 3976 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 2927; Fungi - 443; Plants - 206; Viruses - 0; Other Eukaryotes - 401 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    7422670..7425574 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122145.5 → NP_197632.1  Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197632.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FMR1
    UniProtKB/TrEMBL
    A0A178UPX4
    Conserved Domains (2) summary
    smart00324
    Location:178 → 337
    RhoGAP; GTPase-activator protein for Rho-like GTPases
    cd00132
    Location:115 → 155
    CRIB; PAK (p21 activated kinase) Binding Domain (PBD), binds Cdc42p- and/or Rho-like small GTPases; also known as the Cdc42/Rac interactive binding (CRIB) motif; has been shown to inhibit transcriptional activation and cell transformation mediated by the ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FMR1.1

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