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Polynucleotide adenylyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832434, updated on 18-Sep-2024

Summary

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Official Full Name
Polynucleotide adenylyltransferase family protein
Primary source
TAIR:AT5G23690
Locus tag
AT5G23690
See related
Araport:AT5G23690
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MQM1.4; MQM1_4
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Genomic context

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Location:
chromosome: 5
Exon count:
14
Sequence:
Chromosome: 5; NC_003076.8 (7987493..7990664)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene long chain base2 Neighboring gene Sterile alpha motif (SAM) domain-containing protein Neighboring gene ncRNA Neighboring gene coiled-coil protein Neighboring gene DNA binding / DNA-directed RNA polymerase Neighboring gene dual specificity protein phosphatase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_122274.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Polynucleotide adenylyltransferase family protein
NP_197758.2
  • Polynucleotide adenylyltransferase family protein; FUNCTIONS IN: RNA binding, nucleotidyltransferase activity; INVOLVED IN: RNA processing; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Poly A polymerase, head domain (InterPro:IPR002646); BEST Arabidopsis thaliana protein match is: polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein (TAIR:AT3G48830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    7987493..7990664
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122274.3 → NP_197758.2  Polynucleotide adenylyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197758.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654G3I8, F4KE92, Q8VXU8
    Conserved Domains (1) summary
    TIGR01942
    Location:73 → 398
    pcnB; poly(A) polymerase
Nucleotide Protein
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