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AAP7 amino acid permease 7 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832446, updated on 18-Sep-2024

Summary

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Official Symbol
AAP7
Official Full Name
amino acid permease 7
Primary source
TAIR:AT5G23810
Locus tag
AT5G23810
See related
Araport:AT5G23810
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
amino acid permease 7; MRO11.15; MRO11_15
Summary
Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies.
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Genomic context

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See AAP7 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (8028238..8030888)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene galactinol synthase 5 Neighboring gene agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 10) Neighboring gene MD-2-related lipid recognition domain-containing protein Neighboring gene MD-2-related lipid recognition domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High affinity amino acid transporters specifically expressed in xylem parenchyma and developing seeds of Arabidopsis. Okumoto S, et al. J Biol Chem, 2002 Nov 22. PMID 12244056
  2. Substrate specificity and expression profile of amino acid transporters (AAPs) in Arabidopsis. Fischer WN, et al. J Biol Chem, 1995 Jul 7. PMID 7608199
  3. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001036857.1
NM_001343829.1
NM_122286.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
NOT enables amino acid transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables amino acid transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within amino acid transport ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
amino acid permease 7
NP_001031934.1
  • amino acid permease 7 (AAP7); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 3 (TAIR:AT1G77380.1); Has 1654 Blast hits to 1648 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 179; Fungi - 204; Plants - 1055; Viruses - 0; Other Eukaryotes - 216 (source: NCBI BLink).
NP_197770.1
  • amino acid permease 7 (AAP7); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 8 (TAIR:AT1G10010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    8028238..8030888
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001343827.1 → NP_001330892.1  amino acid permease 7 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BC87

  2. NM_001343828.1 → NP_001330893.1  amino acid permease 7 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BC79

  3. NM_122286.4 → NP_197770.1  amino acid permease 7 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197770.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V350, Q941E6, Q9FF99
    UniProtKB/TrEMBL
    A0A178UAY9
    Conserved Domains (1) summary
    cl00456
    Location:26 → 462
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  4. NM_001343829.1 → NP_001330894.1  amino acid permease 7 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BC87

  5. NM_001036857.1 → NP_001031934.1  amino acid permease 7 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031934.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FF99
    Conserved Domains (1) summary
    cl00456
    Location:26 → 338
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FF99.1

Gene LinkOut

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