U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

WRKY30 WRKY DNA-binding protein 30 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832476, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
WRKY30
Official Full Name
WRKY DNA-binding protein 30
Primary source
TAIR:AT5G24110
Locus tag
AT5G24110
See related
Araport:AT5G24110
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30; ATWRKY30; MLE8.3; MLE8_3; WRKY DNA-binding protein 30
Summary
member of WRKY Transcription Factor; Group III
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See WRKY30 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (8153115..8154710, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene arabinogalactan protein 41 Neighboring gene sigma factor E Neighboring gene polypyrimidine tract-binding-like protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Transcription factor WRKY30 mediates resistance to Cucumber mosaic virus in Arabidopsis. Zou L, et al. Biochem Biophys Res Commun, 2019 Sep 10. PMID 31311650
  2. Overexpression of AtWRKY30 enhances abiotic stress tolerance during early growth stages in Arabidopsis thaliana. Scarpeci TE, et al. Plant Mol Biol, 2013 Oct. PMID 23794142
  3. WRKY54 and WRKY70 co-operate as negative regulators of leaf senescence in Arabidopsis thaliana. Besseau S, et al. J Exp Bot, 2012 Apr. PMID 22268143, Free PMC Article
  4. AtWRKY40 and AtWRKY63 modulate the expression of stress-responsive nuclear genes encoding mitochondrial and chloroplast proteins. Van Aken O, et al. Plant Physiol, 2013 May. PMID 23509177, Free PMC Article
  5. UV-B signaling pathways with different fluence-rate response profiles are distinguished in mature Arabidopsis leaf tissue by requirement for UVR8, HY5, and HYH. Brown BA, et al. Plant Physiol, 2008 Feb. PMID 18055587, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The expression of WRKY30 was induced by Cucumber mosaic virus (CMV) infection and wrky30 mutant displayed more susceptibility (including higher oxidative damages, induced reactive oxygen species synthesis and more PSII photochemistry compromise), while WRKY30 overexpression plants (WRKY30OX) exhibited more resistance to CMV infection.
    Title: Transcription factor WRKY30 mediates resistance to Cucumber mosaic virus in Arabidopsis.
  2. results presented here show that AtWRKY30 is responsive to several stress conditions either from abiotic or biotic origin, suggesting that AtWRKY30 could have a role in the activation of defence responses at early stages of Arabidopsis growth
    Title: Overexpression of AtWRKY30 enhances abiotic stress tolerance during early growth stages in Arabidopsis thaliana.
Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_122316.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables transcription cis-regulatory region binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in leaf senescence IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within response to hydrogen peroxide IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to ozone IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to salicylic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
WRKY DNA-binding protein 30
NP_568439.1
  • WRKY DNA-binding protein 30 (WRKY30); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    8153115..8154710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122316.3 → NP_568439.1  WRKY DNA-binding protein 30 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568439.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FL62
    UniProtKB/TrEMBL
    A0A178UIT8, A0A5S9Y6Q2
    Conserved Domains (1) summary
    smart00774
    Location:112 → 172
    WRKY; DNA binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FL62.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools