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CCB3 cofactor assembly, complex C (B6F) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 833608, updated on 18-Sep-2024

Summary

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Official Symbol
CCB3
Official Full Name
cofactor assembly, complex C (B6F)
Primary source
TAIR:AT5G36120
Locus tag
AT5G36120
See related
Araport:AT5G36120
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
''cofactor assembly; atylmg3; cofactor assembly; complex C (B6F); complex C (B6F)''; MAB16.6; MAB16_6; YLMG3
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Genomic context

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See CCB3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (14198586..14199431, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene cytochrome P450, family 716, subfamily A, polypeptide 1 Neighboring gene pseudo Neighboring gene Cytochrome P450 superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A novel pathway of cytochrome c biogenesis is involved in the assembly of the cytochrome b6f complex in arabidopsis chloroplasts. Lezhneva L, et al. J Biol Chem, 2008 Sep 5. PMID 18593701, Free PMC Article
  2. In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. Friso G, et al. Plant Cell, 2004 Feb. PMID 14729914, Free PMC Article
  3. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_123003.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cytochrome b6f complex assembly IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in chloroplast thylakoid membrane HDA PubMed 

General protein information

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Preferred Names
cofactor assembly, complex C (B6F)
NP_198461.2
  • ''cofactor assembly, complex C (B6F)'' (CCB3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    14198586..14199431 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123003.4 → NP_198461.2  cofactor assembly, complex C (B6F) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198461.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8RWM7, Q9LVY6
    UniProtKB/TrEMBL
    A0A178UCR5, A0A7G2FIK4
    Conserved Domains (1) summary
    pfam02325
    Location:89 → 157
    YGGT; YGGT family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8RWM7.1

Gene LinkOut

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