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PEN3 putative pentacyclic triterpene synthase 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 833612, updated on 18-Sep-2024

Summary

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Official Symbol
PEN3
Official Full Name
putative pentacyclic triterpene synthase 3
Primary source
TAIR:AT5G36150
Locus tag
AT5G36150
See related
Araport:AT5G36150
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATPEN3; MAB16.10; MAB16_10; putative pentacyclic triterpene synthase 3
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Genomic context

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See PEN3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
14
Sequence:
Chromosome: 5; NC_003076.8 (14220634..14226211, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Cytochrome P450 superfamily protein Neighboring gene cytochrome P450, family 716, subfamily A, polypeptide 2 Neighboring gene ncRNA Neighboring gene Tyrosine transaminase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular cloning and expression in yeast of 2,3-oxidosqualene-triterpenoid cyclases from Arabidopsis thaliana. Husselstein-Muller T, et al. Plant Mol Biol, 2001 Jan. PMID 11247608
  2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables lupeol synthase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in triterpenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
putative pentacyclic triterpene synthase 3
NP_001318680.1
  • putative pentacyclic triterpene synthase 3 (PEN3); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: baruol synthase 1 (TAIR:AT4G15370.1); Has 1967 Blast hits to 1902 proteins in 558 species: Archae - 4; Bacteria - 834; Metazoa - 81; Fungi - 233; Plants - 606; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    14220634..14226211 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001344127.1 → NP_001318680.1  putative pentacyclic triterpene synthase 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LVY2
    UniProtKB/TrEMBL
    A0A178UH52

  2. NM_123006.4 → NP_198464.4  putative pentacyclic triterpene synthase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198464.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LVY2
    UniProtKB/TrEMBL
    A0A178UH52
    Conserved Domains (2) summary
    PLN03012
    Location:1 → 758
    PLN03012; Camelliol C synthase
    cd02892
    Location:99 → 752
    SQCY_1; Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LVY2.2

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