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F-box associated ubiquitination effector family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834150, updated on 18-Sep-2024

Summary

Official Full Name
F-box associated ubiquitination effector family protein
Primary source
TAIR:AT5G41490
Locus tag
AT5G41490
See related
Araport:AT5G41490
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MYC6.19; MYC6_19
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Genomic context

Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (16600445..16601608)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Folylpolyglutamate synthetase family protein Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene miscRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
F-box associated ubiquitination effector family protein
NP_198964.1
  • F-box associated ubiquitination effector family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT5G41510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    16600445..16601608
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123513.1NP_198964.1  F-box associated ubiquitination effector family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_198964.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FH73
    UniProtKB/TrEMBL
    A0A654G745
    Conserved Domains (3) summary
    pfam07734
    Location:209371
    FBA_1; F-box associated
    TIGR01640
    Location:101344
    F_box_assoc_1; F-box protein interaction domain
    pfam00646
    Location:549
    F-box; F-box domain