U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CML43 calmodulin like 43 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834473, updated on 18-Sep-2024

Summary

Official Symbol
CML43
Official Full Name
calmodulin like 43
Primary source
TAIR:AT5G44460
Locus tag
AT5G44460
See related
Araport:AT5G44460
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
calmodulin like 43; MFC16.12; MFC16_12
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See CML43 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (17916993..17918001)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene FAD-binding Berberine family protein Neighboring gene alpha amino-terminal protein methyltransferase Neighboring gene ribonuclease H superfamily polynucleotidyl transferase Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

NM_123813.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calcium ion binding IDA
Inferred from Direct Assay
more info
PubMed 
enables calcium ion sensor activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in response to calcium ion IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
calmodulin like 43
NP_199259.1
  • calmodulin like 43 (CML43); FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: root, cultured cell; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 42 (TAIR:AT4G20780.1); Has 15485 Blast hits to 11560 proteins in 1261 species: Archae - 1; Bacteria - 65; Metazoa - 6030; Fungi - 3167; Plants - 4134; Viruses - 0; Other Eukaryotes - 2088 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    17916993..17918001
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123813.4NP_199259.1  calmodulin like 43 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199259.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q42141, Q9FI19
    UniProtKB/TrEMBL
    A0A178UMU5, A0A5S9YD92, A0A654G7V2
    Conserved Domains (1) summary
    PTZ00184
    Location:33174
    PTZ00184; calmodulin; Provisional