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Tapetum specific protein TAP35/TAP44 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834481, updated on 18-Sep-2024

Summary

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Official Full Name
Tapetum specific protein TAP35/TAP44
Primary source
TAIR:AT5G44540
Locus tag
AT5G44540
See related
Araport:AT5G44540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MFC16.22; MFC16_22
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (17941287..17941646, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene target of AVRB operation1 Neighboring gene NagB/RpiA/CoA transferase-like superfamily protein Neighboring gene Subtilase family protein Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_123821.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Tapetum specific protein TAP35/TAP44
NP_199267.1
  • Tapetum specific protein TAP35/TAP44; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Tapetum specific TAP35TAP44 (InterPro:IPR009891); BEST Arabidopsis thaliana protein match is: Tapetum specific protein TAP35/TAP44 (TAIR:AT4G20420.1); Has 22 Blast hits to 22 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    17941287..17941646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123821.1 → NP_199267.1  Tapetum specific protein TAP35/TAP44 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199267.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2FDL5, Q9FI11
    Conserved Domains (1) summary
    pfam07265
    Location:1 → 119
    TAP35_44; Tapetum specific protein TAP35/TAP44
Nucleotide Protein
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