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transmembrane protein, putative (DUF594) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834590, updated on 18-Sep-2024

Summary

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Official Full Name
transmembrane protein, putative (DUF594)
Primary source
TAIR:AT5G45540
Locus tag
AT5G45540
See related
Araport:AT5G45540
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MFC19.21; MFC19_21
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (18457870..18460914, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene transmembrane protein, putative (DUF594) Neighboring gene Mob1/phocein family protein Neighboring gene Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_123922.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
transmembrane protein, putative (DUF594)
NP_199367.1
  • Protein of unknown function (DUF594); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF594 (InterPro:IPR007658); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF594) (TAIR:AT5G45480.1); Has 1285 Blast hits to 857 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1285; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    18457870..18460914 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123922.3 → NP_199367.1  transmembrane protein, putative (DUF594) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199367.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YCE6, Q9FHI2
    Conserved Domains (2) summary
    pfam04578
    Location:731 → 784
    DUF594; Protein of unknown function, DUF594
    pfam13968
    Location:52 → 425
    DUF4220; Domain of unknown function (DUF4220)
Nucleotide Protein
Heading Accession and Version

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