U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NUDT8 nudix hydrolase homolog 8 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834771, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
NUDT8
Official Full Name
nudix hydrolase homolog 8
Primary source
TAIR:AT5G47240
Locus tag
AT5G47240
See related
Araport:AT5G47240
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
atnudt8; MQL5.10; MQL5_10; nudix hydrolase homolog 8
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NUDT8 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Sequence:
Chromosome: 5; NC_003076.8 (19183523..19185644)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ethylene responsive element binding factor 5 Neighboring gene ncRNA Neighboring gene LRR and NB-ARC domains-containing disease resistance protein Neighboring gene putative disease resistance protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Functional characterization of a Nudix hydrolase AtNUDX8 upon pathogen attack indicates a positive role in plant immune responses. Fonseca JP, et al. PLoS One, 2014. PMID 25436909, Free PMC Article
  2. Comprehensive analysis of cytosolic Nudix hydrolases in Arabidopsis thaliana. Ogawa T, et al. J Biol Chem, 2005 Jul 1. PMID 15878881
  3. A downstream mediator in the growth repression limb of the jasmonate pathway. Yan Y, et al. Plant Cell, 2007 Aug. PMID 17675405, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Nudix hydrolase 8 is involved in plant immunity as a positive regulator of defense in Arabidopsis.
    Title: Functional characterization of a Nudix hydrolase AtNUDX8 upon pathogen attack indicates a positive role in plant immune responses.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

NM_124095.4

Gene Ontology Provided by TAIR

Process Evidence Code Pubs
acts_upstream_of_or_within response to wounding IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
nudix hydrolase homolog 8
NP_568680.1
  • nudix hydrolase homolog 8 (NUDT8); FUNCTIONS IN: hydrolase activity; INVOLVED IN: response to wounding; LOCATED IN: cytosol; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), Nudix hydrolase 6-like (InterPro:IPR003293), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 2 (TAIR:AT5G47650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    19183523..19185644
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001344713.1 → NP_001331621.1  nudix hydrolase homolog 8 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BEI5, A0A7G2FE68

  2. NM_124095.4 → NP_568680.1  nudix hydrolase homolog 8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568680.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L7W2, Q8LAJ0, Q9LVT5
    UniProtKB/TrEMBL
    A0A5S9YBU1, A0A7G2FE68
    Conserved Domains (2) summary
    cd04670
    Location:189 → 320
    Nudix_Hydrolase_12; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...
    pfam18290
    Location:96 → 175
    Nudix_hydro; Nudix hydrolase domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8L7W2.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.