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TRM24 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835260, updated on 18-Sep-2024

Summary

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Official Symbol
TRM24
Official Full Name
uncharacterized protein
Primary source
TAIR:AT5G51850
Locus tag
AT5G51850
See related
Araport:AT5G51850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MIO24.1; MIO24_1; TON1 Recruiting Motif 24
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Genomic context

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See TRM24 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (21079106..21081632)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene junctophilin-like protein Neighboring gene Defensin-like (DEFL) family protein Neighboring gene K-box region and MADS-box transcription factor family protein Neighboring gene AGAMOUS-like 71

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of a phosphatase 2C protein as an interacting partner of the histone acetyltransferase GCN5 in Arabidopsis. Servet C, et al. Biochim Biophys Acta, 2008 Jun-Jul. PMID 18498779
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001344964.1
NM_124564.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_199998.1
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62170.1); Has 384 Blast hits to 375 proteins in 79 species: Archae - 0; Bacteria - 14; Metazoa - 135; Fungi - 31; Plants - 92; Viruses - 0; Other Eukaryotes - 112 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21079106..21081632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124564.4 → NP_199998.1  uncharacterized protein AT5G51850 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199998.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UFN7, A0A178UGY2, Q9FLH6
    Conserved Domains (2) summary
    pfam14309
    Location:433 → 515
    DUF4378; Domain of unknown function (DUF4378)
    pfam14383
    Location:107 → 138
    VARLMGL; DUF761-associated sequence motif

  2. NM_001344964.1 → NP_001332233.1  uncharacterized protein AT5G51850 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UGY2, A0A1P8BGA2
Nucleotide Protein
Heading Accession and Version

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