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DnaJ heat shock amino-terminal domain protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835396, updated on 18-Sep-2024

Summary

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Official Full Name
DnaJ heat shock amino-terminal domain protein
Primary source
TAIR:AT5G53150
Locus tag
AT5G53150
See related
Araport:AT5G53150
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MFH8.9; MFH8_9
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (21553355..21557592)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Protein phosphatase 2C family protein Neighboring gene ncRNA Neighboring gene regulatory components of ABA receptor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Waidmann S, et al. Plant Cell, 2014 Nov. PMID 25387881, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001345035.1
NM_001345038.1
NM_001345039.1
NM_124694.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
DnaJ heat shock amino-terminal domain protein
NP_001318793.1
  • DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 19161 Blast hits to 18960 proteins in 3050 species: Archae - 127; Bacteria - 8115; Metazoa - 3268; Fungi - 1518; Plants - 2179; Viruses - 8; Other Eukaryotes - 3946 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21553355..21557592
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001345036.1 → NP_001331440.1  DnaJ heat shock amino-terminal domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YDJ6, Q9FGM2

  2. NM_001345037.1 → NP_001331441.1  DnaJ heat shock amino-terminal domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YDJ6, Q9FGM2

  3. NM_001345035.1 → NP_001318793.1  DnaJ heat shock amino-terminal domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YDJ6, Q6NMG4

  4. NM_124694.4 → NP_200127.2  DnaJ heat shock amino-terminal domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200127.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YDJ6, Q6NMG4
    Conserved Domains (2) summary
    pfam00226
    Location:66 → 127
    DnaJ; DnaJ domain
    pfam11926
    Location:447 → 653
    DUF3444; Domain of unknown function (DUF3444)

  5. NM_001345039.1 → NP_001331442.1  DnaJ heat shock amino-terminal domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YDJ6, Q9FGM2

  6. NM_001345038.1 → NP_001331439.1  DnaJ heat shock amino-terminal domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BDU8
Nucleotide Protein
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