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TAT7 Tyrosine transaminase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835480, updated on 18-Sep-2024

Summary

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Official Symbol
TAT7
Official Full Name
Tyrosine transaminase family protein
Primary source
TAIR:AT5G53970
Locus tag
AT5G53970
See related
Araport:AT5G53970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K19P17.14; K19P17_14; tyrosine aminotransferase 7
Summary
encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment
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Genomic context

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See TAT7 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Sequence:
Chromosome: 5; NC_003076.8 (21910471..21912809)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Mid-1-related chloride channel domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene homeobox protein 52

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A tyrosine aminotransferase involved in tocopherol synthesis in Arabidopsis. Riewe D, et al. Plant J, 2012 Sep. PMID 22540282
  2. TAT1 and TAT2 tyrosine aminotransferases have both distinct and shared functions in tyrosine metabolism and degradation in Arabidopsis thaliana. Wang M, et al. J Biol Chem, 2019 Mar 8. PMID 30630953, Free PMC Article
  3. Biochemical properties and subcellular localization of tyrosine aminotransferases in Arabidopsis thaliana. Wang M, et al. Phytochemistry, 2016 Dec. PMID 27726859
  4. Tocopherol content and activities of tyrosine aminotransferase and cystine lyase in Arabidopsis under stress conditions. Holländer-Czytko H, et al. J Plant Physiol, 2005 Jul. PMID 16008101
  5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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NM_124776.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables L-tyrosine-2-oxoglutarate transaminase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables L-tyrosine-2-oxoglutarate transaminase activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables L-tyrosine-2-oxoglutarate transaminase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables L-tyrosine-2-oxoglutarate transaminase activity TAS
Traceable Author Statement
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within tyrosine catabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within vitamin E biosynthetic process IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within vitamin E biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Tyrosine transaminase family protein
NP_200208.1
  • Tyrosine transaminase family protein; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT5G36160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21910471..21912809
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124776.5 → NP_200208.1  Tyrosine transaminase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200208.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8H146, Q9FN30
    UniProtKB/TrEMBL
    A0A5S9YDU8
    Conserved Domains (2) summary
    cd00609
    Location:36 → 400
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PLN02656
    Location:1 → 411
    PLN02656; tyrosine transaminase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FN30.1

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