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HSFA9 heat shock transcription factor A9 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835493, updated on 18-Sep-2024

Summary

Official Symbol
HSFA9
Official Full Name
heat shock transcription factor A9
Primary source
TAIR:AT5G54070
Locus tag
AT5G54070
See related
Araport:AT5G54070
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A9; ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A9; AT-HSFA9; heat shock transcription factor A9; heat shock transcription factor A9; MJP23.4; MJP23_4
Summary
A member of Heat Stress Transcription Factor (Hsf) family. Not responding to heat stress. Is regulated by the seed-specific transcription factor ABI3. In turn, it regulates other heat stress proteins including Hsp17.4-CI, Hsp17.7-CII and Hsp101 during seed maturation.
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Genomic context

See HSFA9 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (21943983..21945651)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene egg cell-secreted-like protein Neighboring gene miscRNA Neighboring gene B3 domain protein Neighboring gene ncRNA Neighboring gene homogentisate 1,2-dioxygenase Neighboring gene DNA mismatch repair protein MutS, type 2 Neighboring gene proteoglycan-like protein

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_124786.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within regulation of DNA-templated transcription ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
heat shock transcription factor A9
NP_200218.1
  • heat shock transcription factor A9 (HSFA9); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED DURING: seed maturation stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A2 (TAIR:AT2G26150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21943983..21945651
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124786.4NP_200218.1  heat shock transcription factor A9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200218.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LVW2
    UniProtKB/TrEMBL
    A0A178UP77, A0A5S9YDV3, A0A7G2FKH7
    Conserved Domains (1) summary
    smart00415
    Location:71161
    HSF; heat shock factor