U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ILL3 IAA-leucine-resistant (ILR1)-like 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835501, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
ILL3
Official Full Name
IAA-leucine-resistant (ILR1)-like 3
Primary source
TAIR:AT5G54140
Locus tag
AT5G54140
See related
Araport:AT5G54140
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
IAA-leucine-resistant (ILR1)-like 3; MJP23.12; MJP23_12
Summary
encodes a protein similar to IAA amino acid conjugate hydrolase
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ILL3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (21965667..21968061)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene membrane-associated mannitol-induced Neighboring gene Calcium-binding endonuclease/exonuclease/phosphatase family Neighboring gene uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. IAR3 encodes an auxin conjugate hydrolase from Arabidopsis. Davies RT, et al. Plant Cell, 1999 Mar. PMID 10072397, Free PMC Article
  2. A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Waidmann S, et al. Plant Cell, 2014 Nov. PMID 25387881, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help
NM_124794.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables IAA-amino acid conjugate hydrolase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within auxin metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
IAA-leucine-resistant (ILR1)-like 3
NP_200225.1
  • IAA-leucine-resistant (ILR1)-like 3 (ILL3); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: peptidase M20/M25/M40 family protein (TAIR:AT1G51760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    21965667..21968061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124794.3 → NP_200225.1  IAA-leucine-resistant (ILR1)-like 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200225.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O81641
    UniProtKB/TrEMBL
    A0A654GBC1
    Conserved Domains (2) summary
    cd08017
    Location:41 → 418
    M20_IAA_Hyd; M20 Peptidase Indole-3-acetic acid amino acid hydrolase
    COG1473
    Location:31 → 418
    AbgB; Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O81641.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools