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hapless protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835723, updated on 18-Sep-2024

Summary

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Official Full Name
hapless protein
Primary source
TAIR:AT5G56240
Locus tag
AT5G56240
See related
Araport:AT5G56240
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K24C1.5; K24C1_5
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Genomic context

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Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (22759663..22764587, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene prenylated RAB acceptor 1.G2 Neighboring gene hapless 8 Neighboring gene ncRNA Neighboring gene Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001345189.1
NM_125007.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
hapless protein
NP_001190554.1
  • INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1).
NP_200435.3
  • BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    22759663..22764587 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203625.2 → NP_001190554.1  hapless protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190554.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UNZ7, A0A384KS23, A0A5S9YFM2, F4K7K8

  2. NM_001345188.1 → NP_001330447.1  hapless protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UNZ7, A0A384KS23, A0A5S9YFM2, F4K7K8

  3. NM_125007.5 → NP_200435.3  hapless protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200435.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UR96, A0A5S9YFM2, F4K7K7

  4. NM_001345189.1 → NP_001330446.1  hapless protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UNZ7, A0A384KS23, A0A5S9YFM2, F4K7K8
Nucleotide Protein
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