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Cystatin/monellin superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835794, updated on 18-Sep-2024

Summary

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Official Full Name
Cystatin/monellin superfamily protein
Primary source
TAIR:AT5G56920
Locus tag
AT5G56920
See related
Araport:AT5G56920
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MHM17.3; MHM17_3
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (23024896..23025915)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene CwfJ-like family protein / zinc finger (CCCH-type) family protein Neighboring gene Proteinase inhibitor I25, cystatin, conserved region Neighboring gene CCCH-type zinc finger family protein Neighboring gene Ribosomal protein S16 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_125074.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Cystatin/monellin superfamily protein
NP_200502.1
  • Cystatin/monellin superfamily protein; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I25, cystatin, conserved region (InterPro:IPR020381), Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: Proteinase inhibitor I25, cystatin, conserved region (TAIR:AT5G56910.1); Has 51 Blast hits to 51 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    23024896..23025915
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125074.1 → NP_200502.1  Cystatin/monellin superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200502.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YEQ8, Q9LTS8
    Conserved Domains (1) summary
    cl09238
    Location:96 → 160
    CY; Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.
Nucleotide Protein
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