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Mannose-P-dolichol utilization defect 1 protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836066, updated on 18-Sep-2024

Summary

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Official Full Name
Mannose-P-dolichol utilization defect 1 protein
Primary source
TAIR:AT5G59470
Locus tag
AT5G59470
See related
Araport:AT5G59470
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F2O15.15; F2O15_15
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (23978550..23979478)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene GRAS family transcription factor Neighboring gene ncRNA Neighboring gene scarecrow-like transcription factor 11 (SCL11) Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001203640.2
NM_125338.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Mannose-P-dolichol utilization defect 1 protein
NP_001190569.1
  • Mannose-P-dolichol utilization defect 1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603); BEST Arabidopsis thaliana protein match is: Mannose-P-dolichol utilization defect 1 protein (TAIR:AT4G07390.1).
NP_200755.1
  • Mannose-P-dolichol utilization defect 1 protein; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603), Mannose-P-dolichol utilization defect 1 protein (InterPro:IPR016817); BEST Arabidopsis thaliana protein match is: Mannose-P-dolichol utilization defect 1 protein (TAIR:AT4G07390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    23978550..23979478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125338.3 → NP_200755.1  Mannose-P-dolichol utilization defect 1 protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200755.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GXW3, Q9LTI3
    UniProtKB/TrEMBL
    A0A178UKC5, A0A5S9YFN3, A0A654GCH6
    Conserved Domains (1) summary
    TIGR00951
    Location:29 → 224
    2A43; Lysosomal Cystine Transporter

  2. NM_001203640.2 → NP_001190569.1  Mannose-P-dolichol utilization defect 1 protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190569.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2FKF0
    Conserved Domains (1) summary
    pfam04193
    Location:31 → 89
    PQ-loop; PQ loop repeat
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LTI3.1

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