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Anion-transporting ATPase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836194, updated on 18-Sep-2024

Summary

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Official Full Name
Anion-transporting ATPase
Primary source
TAIR:AT5G60730
Locus tag
AT5G60730
See related
Araport:AT5G60730
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MUP24.8; MUP24_8
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Genomic context

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Location:
chromosome: 5
Exon count:
11
Sequence:
Chromosome: 5; NC_003076.8 (24422686..24425540)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene electron transporter, putative (Protein of unknown function, DUF547) Neighboring gene ABC transporter family protein Neighboring gene CAAX amino terminal protease family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Loss of GET pathway orthologs in Arabidopsis thaliana causes root hair growth defects and affects SNARE abundance. Xing S, et al. Proc Natl Acad Sci U S A, 2017 Feb 21. PMID 28096354, Free PMC Article
  2. In-depth temporal transcriptome profiling reveals a crucial developmental switch with roles for RNA processing and organelle metabolism that are essential for germination in Arabidopsis. Narsai R, et al. Plant Physiol, 2011 Nov. PMID 21908688, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_125466.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in mitochondrial matrix IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion HDA PubMed 
located_in plastid HDA PubMed 

General protein information

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Preferred Names
Anion-transporting ATPase
NP_200881.2
  • Anion-transporting ATPase; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10350.1); Has 2815 Blast hits to 2379 proteins in 780 species: Archae - 173; Bacteria - 1911; Metazoa - 144; Fungi - 222; Plants - 104; Viruses - 0; Other Eukaryotes - 261 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    24422686..24425540
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125466.4 → NP_200881.2  Anion-transporting ATPase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_200881.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q5XF80, Q9FF47
    UniProtKB/TrEMBL
    A0A178UJB5, A0A5S9YG14, A0A654GCX1
    Conserved Domains (1) summary
    cd02035
    Location:83 → 386
    ArsA; Arsenical pump-driving ATPase ArsA
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5XF80.1

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