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P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836397, updated on 18-Sep-2024

Summary

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Official Full Name
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Primary source
TAIR:AT5G62760
Locus tag
AT5G62760
See related
Araport:AT5G62760
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MQB2.8; MQB2_8
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Genomic context

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Location:
chromosome: 5
Exon count:
12
Sequence:
Chromosome: 5; NC_003076.8 (25204472..25209583, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene SPFH/Band 7/PHB domain-containing membrane-associated protein family Neighboring gene uncharacterized protein Neighboring gene membrane-associated kinase regulator, putative (DUF1645) Neighboring gene Chaperone DnaJ-domain superfamily protein Neighboring gene 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

NM_001203669.1
NM_001345559.1
NM_001345560.1
NM_180919.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
P-loop containing nucleoside triphosphate hydrolases superfamily protein
NP_001190598.1
  • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages.
NP_001190599.1
  • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages.
NP_568961.3
  • P-loop containing nucleoside triphosphate hydrolases superfamily protein; Has 7233 Blast hits to 5023 proteins in 448 species: Archae - 2; Bacteria - 468; Metazoa - 2972; Fungi - 1085; Plants - 1472; Viruses - 401; Other Eukaryotes - 833 (source: NCBI BLink).
NP_851250.1
  • P-loop containing nucleoside triphosphate hydrolases superfamily protein; Has 7376 Blast hits to 5164 proteins in 470 species: Archae - 2; Bacteria - 500; Metazoa - 3049; Fungi - 1087; Plants - 1477; Viruses - 399; Other Eukaryotes - 862 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25204472..25209583 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203670.2 → NP_001190599.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190599.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654GDK5, Q9FM17
    Conserved Domains (1) summary
    pfam08433
    Location:279 → 384
    KTI12; Chromatin associated protein KTI12

  2. NM_125671.4 → NP_568961.3  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568961.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UNV8, Q56XD6

  3. NM_180919.1 → NP_851250.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_851250.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4K7T1

  4. NM_001203669.1 → NP_001190598.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190598.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4K7S9
    Conserved Domains (1) summary
    pfam13207
    Location:278 → 296
    AAA_17; AAA domain

  5. NM_001345559.1 → NP_001332400.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UNV8, A0A178URL7, A0A1P8BGU2, A0A384KCC7

  6. NM_001345560.1 → NP_001332401.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UNV8, A0A178URL7, A0A1P8BGU2, A0A384KCC7
Nucleotide Protein
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