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Phosphoglycerate mutase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836405, updated on 18-Sep-2024

Summary

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Official Full Name
Phosphoglycerate mutase family protein
Primary source
TAIR:AT5G62840
Locus tag
AT5G62840
See related
Araport:AT5G62840
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MQB2.16; MQB2_16
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (25228139..25229738, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene peroxin 14 Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene F-box associated ubiquitination effector family protein Neighboring gene Nodulin MtN3 family protein Neighboring gene ncRNA Neighboring gene F-box associated ubiquitination effector family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001345562.1
NM_125679.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Phosphoglycerate mutase family protein
NP_201090.1
  • Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 111 Blast hits to 111 proteins in 37 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25228139..25229738 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125679.2 → NP_201090.1  Phosphoglycerate mutase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201090.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UQ29, A0A5S9YIP8, Q9FM11
    Conserved Domains (1) summary
    smart00855
    Location:79 → 238
    PGAM; Phosphoglycerate mutase family

  2. NM_001345562.1 → NP_001331585.1  Phosphoglycerate mutase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BEB7, A0A7G2FM94
Nucleotide Protein
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