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Mitochondrial transcription termination factor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836619, updated on 18-Sep-2024

Summary

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Official Full Name
Mitochondrial transcription termination factor family protein
Primary source
TAIR:AT5G64950
Locus tag
AT5G64950
See related
Araport:AT5G64950
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MXK3.18; MXK3_18
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (25953844..25955202)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene CPR5 protein Neighboring gene ABC2 homolog 13 Neighboring gene cyclin dependent kinase group C2 Neighboring gene Mitochondrial substrate carrier family protein Neighboring gene transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Control of organelle gene expression by the mitochondrial transcription termination factor mTERF22 in Arabidopsis thaliana plants. Shevtsov S, et al. PLoS One, 2018. PMID 30059532, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_125894.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within mitochondrial RNA metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within mitochondrial RNA processing IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Mitochondrial transcription termination factor family protein
NP_201300.1
  • Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    25953844..25955202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_125894.2 → NP_201300.1  Mitochondrial transcription termination factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201300.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UKX3, A0A5S9YH27, Q9LV83
    Conserved Domains (1) summary
    cl19765
    Location:42 → 326
    mTERF; mTERF
Nucleotide Protein
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