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kinectin-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836757, updated on 18-Sep-2024

Summary

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Official Full Name
kinectin-like protein
Primary source
TAIR:AT5G66250
Locus tag
AT5G66250
See related
Araport:AT5G66250
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K1L20.3; K1L20_3
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (26468532..26470556)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001203705.1
NM_126023.3
NM_180951.1
NM_180952.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in negative gravitropism IEA
Inferred from Electronic Annotation
more info
  
involved_in response to red or far red light IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
kinectin-like protein
NP_001190634.1
  • kinectin-related; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17990.1).
NP_201426.3
  • kinectin-related; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17990.1); Has 3697 Blast hits to 3222 proteins in 449 species: Archae - 76; Bacteria - 383; Metazoa - 2011; Fungi - 286; Plants - 250; Viruses - 24; Other Eukaryotes - 667 (source: NCBI BLink).
NP_851282.1
  • kinectin-related; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17990.1); Has 3699 Blast hits to 3224 proteins in 449 species: Archae - 76; Bacteria - 383; Metazoa - 2012; Fungi - 287; Plants - 250; Viruses - 24; Other Eukaryotes - 667 (source: NCBI BLink).
NP_851283.1
  • kinectin-related; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17990.1); Has 3697 Blast hits to 3222 proteins in 449 species: Archae - 76; Bacteria - 383; Metazoa - 2011; Fungi - 286; Plants - 250; Viruses - 24; Other Eukaryotes - 667 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    26468532..26470556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_180952.2 → NP_851283.1  kinectin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_851283.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654GEP0, A0A7G2FM41, Q3E850, Q9FH63
    Conserved Domains (1) summary
    TIGR02169
    Location:40 → 296
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

  2. NM_001203705.1 → NP_001190634.1  kinectin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190634.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2FM41, F4JZ59
    Conserved Domains (1) summary
    TIGR02169
    Location:40 → 316
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

  3. NM_180951.1 → NP_851282.1  kinectin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_851282.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654GEP0, A0A7G2FM41, Q3E850, Q9FH63
    Conserved Domains (1) summary
    TIGR02169
    Location:40 → 296
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

  4. NM_126023.3 → NP_201426.3  kinectin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_201426.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654GEP0, A0A7G2FM41, Q3E850, Q9FH63
    Conserved Domains (1) summary
    TIGR02169
    Location:40 → 296
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
Nucleotide Protein
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