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Mannose-binding lectin superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837085, updated on 18-Sep-2024

Summary

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Official Full Name
Mannose-binding lectin superfamily protein
Primary source
TAIR:AT1G05770
Locus tag
AT1G05770
See related
Araport:AT1G05770
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T20M3.3; T20M3_3
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (1725388..1726321, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene FAM136A-like protein (DUF842) Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Mannose-binding lectin superfamily protein Neighboring gene Vacuolar ATPase assembly integral membrane protein VMA21-like domain-containing protein Neighboring gene microRNA ath-MIR5656 precursor Neighboring gene uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_100457.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Mannose-binding lectin superfamily protein
NP_172068.1
  • Mannose-binding lectin superfamily protein; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT1G05760.1); Has 502 Blast hits to 381 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 502; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1725388..1726321 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100457.4 → NP_172068.1  Mannose-binding lectin superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172068.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9MA49
    UniProtKB/TrEMBL
    A0A654E8D3
    Conserved Domains (1) summary
    smart00915
    Location:23 → 163
    Jacalin; Jacalin-like lectin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9MA49.1

Gene LinkOut

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