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Plant Tudor-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837145, updated on 18-Sep-2024

Summary

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Official Full Name
Plant Tudor-like protein
Primary source
TAIR:AT1G06340
Locus tag
AT1G06340
See related
Araport:AT1G06340
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T2D23.4; T2D23_4
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (1933284..1934103, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene acyl-CoA oxidase 6 Neighboring gene uncharacterized protein Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene Fatty acid desaturase family protein Neighboring gene Fatty acid desaturase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_100515.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Plant Tudor-like protein
NP_172123.1
  • Plant Tudor-like protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT1G09320.1); Has 263 Blast hits to 216 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 260; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    1933284..1934103 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100515.5 → NP_172123.1  Plant Tudor-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172123.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WN93, Q9LMI5
    Conserved Domains (2) summary
    pfam05641
    Location:6 → 68
    Agenet; Agenet domain
    cl22958
    Location:75 → 128
    Agenet; Agenet domain
Nucleotide Protein
Heading Accession and Version

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